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WSL-1565
AB-2550

Cellgraph AB-3000B

  1. H. Hoshino, Y. Nakajima and Y. Ohmiya, Luciferase-YFP fusion tag with enhanced emission for single-cell luminescence imaging. Nature Methods, 4(8), 637-639 (2007)[PubMed]

  2. C. Wu, K. Mino, H. Akimoto, M. Kawabata, K. Nakamura, M. Ozaki and Y. Ohmiya, In vivo far-red luminescence imaging of a biomarker based on BRET from Cypridina bioluminescence to an organic dye. Proc. Natl. Acad. Sci. U.S.A., 106(37), 15599-15603 (2009)[PubMed]

  3. Y. Nakajima, T. Yamazaki, S. Nishii, T. Noguchi, H. Hoshino, K. Niwa, V. R. Viviani and Y. Ohmiya, Enhanced beetle luciferase for high-resolution bioluminescence imaging. PLoS One, 5(4), e10011 (2010)[PubMed]

  4. H. Kwon, T. Enomoto, M. Shimogawara, K. Yasuda, Y. Nakajima and Y. Ohmiya, Bioluminescence imaging of dual gene expression at the single-cell level.Biotechniques, 48(6), 460-462 (2010)[PubMed]

  5. X. Li, Y. Nakajima, K. Niwa, VR. Viviani and Y. Ohmiya, Enhanced red-emitting railroad worm luciferase for bioassays and bioimaging. Protein Sci., 19, 26-33 (2010)[PubMed]

  6. Y. Nakajima and Y. Ohmiya, Bioluminescence assays: multicolor luciferase assay, secreted luciferase assay and imaging luciferase assay. Expert. Opin. Drug Discov., 5(9), 835-849 (2010)[PubMed]

  7. H. Kwon, Y. Ohmiya, K. Honma, S. Honma, T. Nagai, K. Saito and K. Yasuda, Synchronized ATP oscillations have a critical role in prechondrogenic condensation during chondrogenesis. Cell Death Disease, 3. e278 (2012)[PubMed]

  8. C.Wu, KY. Wang, X. Guo, M. Sato, M. Ozaki, S. Shimajiro, Y. Ohmiya and Y. Sasaguri, Rapid methods of detecting the target molecule in immunohistology using a bioluminescence probe. Luminescence, 28(1), 38-43 (2013)[PubMed]

  9. HK. Choe, HD. Kim, SH. Park, HW. Lee, JY. Park, JY. Seong, SL. Lightman, GH. Son and K. Kim, Synchronous activation of gonadotropin-releasing hormone gene transcription and secretion by pulsatile kisspeptin stimulation. Proc. Natl. Acad.Sci. U.S.A.,110(14),5677-5682 (2013)[PubMed]

  10. HJ. Kwon, Y. Ohmiya and K. Yasuda, Dual-color system for simultaneously monitoring intracellular Ca2+ and ATP dynamics. Anal. Biochem., 430(1), 45-47 (2012)[PubMed]

  11. S. Koinuma, T. Asakawa, M. Nagano, K. Furukawa, M. Sujino, K. Masumoto, Y. Nakajima, S. Hashimoto, K. Yagita, Y. Shigeyoshi, Regional circadian period difference in the suprachiasmatic nucleus of the mammalian circadian center. Eur. J. Neurosci., 38(6), 2832-41 (2013)[PubMed]

  12. SK. Chun, J. Jang, S. Chung, H. Yun, NJ. Kim, JW. Jung, GH. Son, YG. Suh and K. Kim, Identification and Validation of Cryptochrome Inhibitors That Modulate the Molecular Circadian Clock. ACS Chem. Biol., 9(3), 703-10 (2014)[PubMed]

  13. M. Yasunaga, Y. Nakajima and Y. Ohmiya, Dual-color bioluminescence imaging assay using green- and red-emitting beetle luciferases at subcellular resolution. Anal. Bioanal. Chem., 406(23), 5735-5742 (2014)[PubMed]

  14. D. Ono, S. Honma and K. Honma, Cryptochromes are critical for the development of coherent circadian rhythms in the mouse suprachiasmatic nucleus. Nat. Commun., 4, 1666 (2013)[PubMed]

  15. M. Yasunaga, K. Murotomi, H. Abe, T. Yamazaki, S. Nishii, T. Ohbayashi, M. Oshimura, T. Noguchi, K. Niwa, Y. Ohmiya and Y. Nakajima, Highly sensitive luciferase reporter assay using a potent destabilization sequence of calpain 3. J. Biotechnol., 194, 115-123 (2015)[PubMed]

  16. J. Koo, HK. Choe, HD. Kim, SK. Chun, GH. Son, K. Kim, Effect of Mefloquine, a Gap Junction Blocker, on Circadian Period2 Gene Oscillation in the Mouse Suprachiasmatic Nucleus Ex Vivo. Endocrinol. Metab., 30(3), 361-370 (2015)[PubMed]

  17. IT. Tokuda, D. Ono, B. Ananthasubramaniam, S. Honma, K. Honma and H. Herzel, Coupling Controls the Synchrony of Clock Cells in Development and Knockouts. Biophys. J., 109(10), 2159-2170 (2015)[PubMed]

  18. M. Yasunaga, Y. Fujita, R. Saito, M. Oshimura and Y. Nakajima, Continuous long-term cytotoxicity monitoring in 3D spheroids of beetle luciferase-expressing hepatocytes by nondestructive bioluminescence measurement. BMC Biotechnol., 17(1):54 (2017)[PubMed]

  19. T. Enomoto, H. Kubota, K. Mori, M. Shimogawara, M. Yoshita, Y. Ohmiya and H. Akiyama, Absolute bioluminescence imaging at the single-cell level with a light signal at the Attowatt level. Biotechniques, 64(6), 270-274 (2018)[PubMed]

  20. IT. Tokuda, D. Ono, S. Honma, K. Honma, H. Herzel, Coherency of circadian rhythms in the SCN is governed by the interplay of two coupling factors. PLoS Comput. Biol., 14(12), e1006607 (2018)[PubMed]

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Cellgraph

Kronos Dio AB-2550

  1. (Hormone, CRE) P. J. He, Y. Fujimoto, N. Yamauchi and M. Hattori, Real-time monitoring of cAMP response element binding protein signaling in porcine granulosa cells modulated by ovarian factors. Mol. Cell. Biochem., 290(1-2), 177-184 (2006)[PubMed]

  2. (Gene silencing by siRNA) F. Sato, M. Kurokawa, N. Yamauchi and M. Hattori, Gene silencing of myostatin in differentiation of chicken embryonic myoblasts by small interfering RNA. Am. J. Physiol., Cell physiol., 291(3), C538-C545 (2006)[PubMed]

  3. (Clock gene) I. Kwon, J. Lee, S. H. Chang, N. C. Jung, B. J. Lee, G. H. Son, K. Kim and K. H. Lee, BMAL1 shuttling controls transactivation and degradation of the CLOCK/BMAL1 heterodimer. Mol. Cell. Biol., 26(19), 7318-7330 (2006)[PubMed]

  4. (Clock gene) A. Fujioka, N. Takashima and Y. Shigeyoshi, Circadian rhythm generation in a glioma cell line. Biochem. Biophys. Res. Commun., 346(1), 169-174 (2006)[PubMed]

  5. (Clock gene) S. Nishide, S. Honma, Y. Nakajima, M. Ikeda, K. Baba, Y. Ohmiya and K. Honma, New reporter system for Per1 and Bmal1 expressions revealed self-sustained circadian rhythms in peripheral tissues. Genes Cells, 11, 1173-1182 (2006) [PubMed]

  6. (Clock gene) P. J. He, M. Hirata, N. Yamauchi, S. Hashimoto and M. Hattori, The disruption of circadian clockwork in differentiating cells from rat reproductive tissues as identified by in vitro real-time monitoring system. J. Endocrinol., 193, 413-420 (2007)[PubMed]

  7. (Hormone, PRE) H. Fukuda, P. J. He, K. Yokota, T. Soh, N. Yamauchi and M. Hattori, Progesterone-dependent and -independent expression of the multidrug resistance type I gene in porcine granulosa cells. Mol. Cell. Biochem., 298, 179-186 (2007)[PubMed]

  8. (Clock gene) P. J. He, M. Hirata, N. Yamauchi, S. Hashimoto and M. Hattori, Gonadotropic regulation of circadian clockwork in rat granulose cells. Mol. Cell. Biochem., 302, 111-118 (2007)[PubMed]

  9. (Clock gene) T. Ohno, Y. Ohnishi and N. Ishida, A novel E4BP4 element drives circadian expression of mPeriod2. Nucleic Acids Res., 35(2), 648-655 (2007)[PubMed]

  10. (Clock gene) H. S. Shim, H. Kim, J. Lee, G. H. Son, S. Cho, T. H. Oh, S. H. Kang, D. S. Seen, K. H. Lee and K. Kim, Rapid activation of CLOCK by Ca2þ-dependent protein kinase C mediates resetting of the mammalian circadian clock. EMBO rep., 8, 366-371 (2007)[PubMed]

  11. (Clock gene) J. Hirayama, S. Sahar, B. Grimaldi, T. Tamaru, K. Takamatsu, Y. Nakahata and P. Sassone-Corsi, CLOCK-mediated acetylation of BMAL1 controls circadian function. Nature, 450, 1086-1090 (2007)[PubMed]

  12. (Dual color luciferase, Clock gene) T. Noguchi, M. Ikeda, Y. Ohmiya and Y. Nakajima, Simultaneous monitoring of independent gene expression patterns in two types of cocultured fibroblasts with different color-emitting luciferases. BMC Biotechnol., 8:40 (2008)[PubMed]

  13. (Clock gene) M. Akashi, N. Hayasaka, S. Yamazaki and K. Node, Mitogen-activated protein kinase is a functional component of the autonomous circadian system in the suprachiasmatic nucleus. J. Neurosci., 28(18), 4619-4623 (2008)[PubMed]

  14. (DDS, Gene transfection) S. Takae, K. Miyata,  M. Oba, T. Ishii, N. Nishiyama, K. Itaka, Y. Yamasaki, H. Koyama, and K. Kataoka, PEG-detachable polyplex micelles based on disulfide-linked block catiomers as bioresponsive nonviral gene vectors. J. Am. Chem. Soc., 130, 6001-6009 (2008)[PubMed]

  15. (Clock gene) Y. Onishi, S. Hanai, T. Ohno, Y. Hara and N. Ishida, Rhythmic SAF-A binding underlies circadian transcription of the Bmal1 gene. Mol. Cell. Biol., 28(10), 3477-3488 (2008)[PubMed]

  16. (Clock gene) J. Lee, Y. Lee, M. J. Lee, E. Park, S. H. Kang, C. H. Chung, K. H. Lee and K. Kim, Dual modification of BMAL1 by SUMO2/3 and ubiquitin promotes circadian activation of the CLOCK/BMAL1 complex. Mol. Cell. Biol., 28(19), 6056-6065 (2008)[PubMed]

  17. (Clock gene) A. Yoshikawa, H. Shimada, K. Numazawa, T. Sasaki, M. Ikeda, M. Kawashima, N. Kato, K. Tokunaga and T. Ebisawa, Establishment of human cell lines showing circadian rhythms of bioluminescence. Neurosci. Lett., 446, 40-44 (2008)[PubMed]

  18. (Clock gene) Y. Yamanaka, S. Honma and K. Honma, Scheduled exposures to a novel environment with a running-wheel differentially accelerate re-entrainment of mice peripheral clocks to new light–dark cycles. Genes to Cells, 13, 497-507 (2008)[PubMed]

  19. (Clock gene) N. Kon, T. Hirota, T. Kawamoto, Y. Kato, T. Tsubota and Y. Fukada, Activation of TGF-β/activin signalling resets the circadian clock through rapid induction of Dec1 transcripts. Nature Cell Biol., 10(12), 1463-1469 (2008)[PubMed]

  20. (DDS, Gene transfection) M. Oba, K. Aoyagi, K. Miyata, Y. Matsumoto, K. Itaka, N. Nishiyama, Y. Yamasaki, H. Koyama and K. Kataoka, Polyplex micelles with cyclic RGD peptide ligands and disulfide cross-links directing to the enhanced transfection via controlled intracellular trafficking. Mol. Pharm., 5(6), 1080-1092 (2008)[PubMed]

  21. (Clock gene) K. Ohsaki, K. Oishi, Y. Kozono, K. Nakayama, K. I. Nakayama and N. Ishida, The role of β-TrCP1 and β-TrCP2 in circadian rhythm generation by mediating degradation of clock protein PER2. J. Biochem., 144(5), 609-618 (2008)[PubMed]

  22. (Clock gene) S. Nishide, S. Honma and K. Honma, The circadian pacemaker in the cultured suprachiasmatic nucleus from pup mice is highly sensitive to external perturbation. Eur. J. Neurosci., 27(19), 2686-2690 (2008)[PubMed]

  23. (Clock gene) F. Yang, Y. Nakajima, M. Kumagai, Y. Ohmiya and M. Ikeda, The molecular mechanism regulating the autonomous circadian expression of Topoisomerase I in NIH3T3 cells. Biochem. Biophys. Res. Commun., 380(1), 22-27 (2009)[PubMed]

  24. (Clock gene, Hormone) S. Koinuma, K. Yagita, A. Fujioka, N. Takashima, T. Takumi and Y. Shigeyoshi, The resetting of the circadian rhythm by Prostaglandin J2 is distinctly phase-dependent. FEBS Lett., 583, 413-418 (2009)[PubMed]

  25. (Apoptosis) A. Kanno, Y. Umezawa and T. Ozawa, Detection of apoptosis using cyclic luciferase in living mammals. Methods Mol. Biol., 574, 105-114 (2009)[PubMed]

  26. (Clock gene, Hormone) M. Hirata, PJ. He, N. Shibuya, M. Uchikawa, N. Yamauchi, S. Hashimoto and M. Hattori, Progesterone, but not estradiol, synchronizes circadian oscillator in the uterus endometrial stromal cells. Mol. Cell. Biochem., 324(1-2), 31-38 (2009)[PubMed]

  27. (Differenciation) M. Kurokawa, F. Sato, S. Aramaki, T. Soh, N. Yamauchi and M. Hattori, Monitor of the myostatin autocrine action during differentiation of embryonic chicken myoblasts into myotubes: effect of IGF-I. Mol. Cell. Biochem., 331(1-2), 193-199 (2009)[PubMed]

  28. (Clock gene) M. Sasaki, H. Yoshitane, NH. Du, T. Okano and Y. Fukada, Preferential inhibition of BMAL2-CLOCK activity by PER2 reemphasizes its negative role and a positive role of BMAL2 in the circadian transcription. J. Biol. Chem., 284(37), 25149-25159 (2009)[PubMed]

  29. (Glycogenesis, Clock gene) R. Doi, K. Oishi and N. Ishida, CLOCK regulates circadian rhythms of hepatic glycogen synthesis through transcriptional activation of Gys2. J. Biol. Chem., 285(29), 22114-22121 (2010)[PubMed]

  30. (Apoptosis, Clock gene) K. Yoshida, P. He, N. Yamauchi, S. Hashimoto and M. Hattori, Up-regulation of circadian clock gene Period 2 in the prostate mesenchymal cells during flutamide-induced apoptosis. Mol. Cell. Biochem., 335(1-2), 37-45 (2010)[PubMed]

  31. (Clock gene) Y. Lee, J. Lee, I. Kwon, Y. Nakajima, Y. Ohmiya, GH. Son, KH. Lee and K. Kim, Coactivation of the CLOCK-BMAL1 complex by CBP mediates resetting of the circadian clock. J. Cell Sci., 123(20), 3547-3557 (2010)[PubMed]

  32. (Clock gene) T. Hirota, N. Kon, T. Itagaki, N. Hoshina, T. Okano, Y. Fukada, Transcriptional repressor TIEG1 regulates Bmal1 gene through GC box and controls circadian clockwork. Genes Cells., 15(2), 111-121 (2010)[PubMed]

  33. (cAMP monitoring) M. Takeuchi, Y. Nagaoka, T. Yamada, H. Takakura and T. Ozawa, Ratiometric bioluminescence indicators for monitoring cyclic adenosine 3',5'-monophosphate in live cells based on luciferase-fragment complementation. Anal. Chem., 82(22), 9306-9313 (2010)[PubMed]

  34. (DDS, Gene transfection) K. Miyata, N. Gouda, H. Takemoto, M. Oba, Y. Lee, H. Koyama, Y. Yamasaki, K. Itaka, N. Nishiyama, K. Kataoka, Enhanced transfection with silica-coated polyplexes loading plasmid DNA. Biomaterials, 31(17), 4764-4770 (2010)[PubMed]

  35. (Gene therapy) M. Oba, Y. Vachutinsky, K. Miyata, M. R. Kano, S. Ikeda, N. Nishiyama, K. Itaka, K. Miyazono, H. Koyama and K. Kataoka, Antiangiogenic gene therapy of solid tumor by systemic injection of polyplex micelles loading plasmid DNA encoding soluble flt-1. Mol. Pharm., 7(2), 501-509 (2010)[PubMed]

  36. (Dual color luciferase, Clock gene) T. Noguchi, T. Michihata, W. Nakamura, T. Takumi, R. Shimizu, M. Yamamoto, M. Ikeda, Y. Ohmiya and Y. Nakajima, Dual-color luciferase mouse directly demonstrates coupled expression of two clock genes. Biochemistry, 49(37), 8053-8061 (2010)[PubMed]

  37. (Clock gene) Y. Onishi, HSG cells, a model in the submandibular clock. Biosci. Rep., 31(1), 57-62 (2011)[PubMed]

  38. (Stress response, Heat shock protein) J. Sun, C. S. Conn, Y. Han, V. Yeung and SB. Qian, PI3K-mTORC1 attenuates stress response by inhibiting cap-independent Hsp70 translation. J. Biol. Chem., 286(8), 6791-6800 (2011)[PubMed]

  39. (Clock gene) M. Uchikawa, M. Kawamura, N. Yamauchi and M. Hattori, Down-regulation of circadian clock gene Period 2 in uterine endometrial stromal cells of pregnant rats during decidualization. Chronobiol. Int., 28(1), 1-9 (2011)[PubMed]

  40. (Apoptosis, Differentiation, Clock gene) G. Chu, K. Yoshida, S. Narahara, M. Uchikawa, M. Kawamura, N. Yamauchi, Y. Xi, Y. Shigeyoshi, S. Hashimoto and M. Hattori, Alterations of circadian clockworks during differentiation and apoptosis of rat ovarian cells. Chronobiol. Int., 28(6), 477-487 (2011)[PubMed]

  41. (Allergy, Clock gene) Y. Nakamura, D. Harama, N. Shimokawa, M. Hara, R. Suzuki, Y. Tahara, K. Ishimaru, R. Katoh, K. Okumura, H. Ogawa, S. Shibata and A. Nakao, Circadian clock gene Period2 regulates a time-of-day-dependent variation in cutaneous anaphylactic reaction. J. Allergy Clin. Immunol., 127(4), 1038-1045 (2011)[PubMed]

  42. (Metabolism, Clock gene) H. Oike, K. Nagai, T. Fukushima, N. Ishida and M. Kobori, Feeding cues and injected nutrients induce acute expression of multiple clock genes in the mouse liver. PLoS One, 6(8), e23709 (2011)[PubMed]

  43. (Food, Clock gene) H. Oike, M. Kobori, T. Suzuki and N. Ishida, Caffeine lengthens circadian rhythms in mice. Biochem. Biophys. Res. Commun., 410(3), 654-658 (2011)[PubMed]

  44. (Toxicological screening) M. Yasunaga, N. Oumi, M. Osaki, Y. Kazuki, T. Nakanishi, M. Oshimura and K. Sato, Establishment and characterization of a transgenic mouse model for in vivo imaging of bmp4 expression in the pancreas. PLoS One, 6(9), e24956 (2011)[PubMed]

  45. (siRNA, DDS)RJ. Christie, K. Miyata, Y. Matsumoto, T. Nomoto, D. Menasco, TC Lai, M. Pennisi, K. Osada, S. Fukushima, N. Nishiyama, Y. Yamasaki and K. Kataoka, Effect of polymer structure on micelles formed between siRNA and cationic block copolymer comprising thiols and amidines. Biomacromolecules, 12(9), 3174-3185 (2011)[PubMed]

  46. (Clock gene) T. Tamaru, M. Hattori, K. Honda, I. Benjamin, T. Ozawa and K. Takamatsu, Synchronization of circadian Per2 rhythms and HSF1-BMAL1:CLOCK interaction in mouse fibroblasts after short-term heat shock pulse. PLoS One, 6(9), e24521 (2011)[PubMed]

  47. (Clock gene) DY. Kim, E. Kwak, SH. Kim, KH. Lee, KC. Woo and KT. Kim, hnRNP Q mediates a phase-dependent translation-coupled mRNA decay of mouse Period3. Nucleic Acids Res., 39(20), 8901-8914 (2011)[PubMed]

  48. (Photoreceptor) D. Kojima, S. Mori, M. Torii, A. Wada, R. Morishita and Y. Fukada, UV-sensitive photoreceptor protein OPN5 in humans and mice. PLoS One, 6(10), e26388 (2011)[PubMed]

  49. (Cell maturation, Clock gene) G. Chu, I. Misawa, H. Chen, N. Yamauchi, Y. Shigeyoshi, S. Hashimoto and M. Hattori, Contribution of FSH and triiodothyronine to the development of circadian clocks during granulosa cell maturation. Am. J. Physiol. Endocrinol. Metab., Epub (2011)[PubMed]

  50. (Clock gene) Y. Onishi, K. Oishi, Y. Kawano and Y. Yamazaki, The harmala alkaloid harmine is a modulator of circadian Bmal1 transcription. Biosci. Rep., 32(1), 45-52 (2012)[PubMed]

  51. (Clock gene) S. Nishide, D. Ono, Y. Yamada, S. Honma and K. Honma, De novosynthesis of PERIOD initiates circadian oscillation in cultured mouse suprachiasmatic nucleus after prolonged inhibition of protein synthesis by cycloheximide. Eur. J. Neurosci., 35(2), 291-299 (2012)[PubMed]

  52. (Apoptosis) M. Ozaki, S. Haga and T. Ozawa, In Vivo Monitoring of Liver Damage Using Caspase-3 Probe. Theranostics, 2(2), 207-214 (2012)[PubMed]

  53. (Chondrogenesis, ATP oscillations) HJ. Kwon, Y. Ohmiya, K. Honma, S. Honma, T. Nagai, K. Saito and K. Yasuda, Synchronized ATP oscillations have a critical rolein prechondrogenic condensation during chondrogenesis. Cell Death Dis, 3, e278 (2012)[PubMed]

  54. (Clock gene) H. Chen, G. Chu, L. Zhao, N. Yamauchi, Y. Shigeyoshi, S. Hashimoto and M. Hattori, Rev-erbα regulates circadian rhythms and StAR expression in rat granulosa cells as identified by the agonist GSK4112. Biochem. Biophys. Res. Commun., 420(2), 374-379 (2012)[PubMed]

  55. (Dual color luciferase, Clock gene) T. Noguchi, M. Ikeda, Y. Ohmiya and Y. Nakajima, A dual-color luciferase assay system reveals circadian resetting of cultured fibroblasts by co-cultured adrenal glands. PLoS One, 7(5), e37093 (2012)[PubMed]

  56. (siRNA, DDS) RJ. Christie, Y. Matsumoto, K. Miyata, T. Nomoto, S. Fukushima, K. Osada, J. Halnaut, F. Pittella, HJ. Kim, N. Nishiyama and K. Kataoka, Targeted polymeric micelles for siRNA treatment of experimental cancer by intravenous injection. ACS Nano, Epub (2012)[PubMed]

  57. (Clock gene) H. Yoshitane, S. Honma, K. Imamura, H. Nakajima, S. Nishide, D. Ono, H. Kiyota, N. Shinozaki, H. Matsuki, N. Wada, H. Doi, T. Hamada, K. Honma and Y. Fukada, JNK regulates the photic response of the mammalian circadian clock. EMBO Rep., 13(5), 455-461 (2012)[PubMed]

  58. (Clock gene) Y. Uchida, T. Osaki, T. Yamasaki, T. Shimomura, S. Hata, K. Horikawa, S. Shibata, T. Todo, J. Hirayama and H. Nishina, Involvement of Stress Kinase Mitogen-activated Protein Kinase Kinase 7 in Regulation of Mammalian Circadian Clock. J. Biol. Chem., 287(11), 8318-26 (2012)[PubMed]

  59. (ATP, Ca2+, Chondrogenesis) HJ. Kwon, Y. Ohmiya and K. Yasuda, Dual-color system for simultaneously monitoring intracellular Ca2+ and ATP dynamics. Anal. Biochem., 430(1), 45-47 (2012)[PubMed]

  60. (Clock gene) Y. Onishi and Y. Kawano, Rhythmic binding of Topoisomerase I impacts on the transcription of Bmal1 and circadian period. Nucleic Acids Res., 40(19), 9482-92 (2012)[PubMed]

  61. (ATP, TGF-β, Chondrogenesis) HJ. Kwon, TGF-β but not BMP signaling induces prechondrogenic condensation through ATP oscillations during chondrogenesis. Biochem. Biophys. Res. Commun., 424(4), 793-800 (2012)[PubMed]

  62. (Chondrogenesis, ATP oscillations) HJ. Kwon, Extracellular ATP signaling via P2X4receptor and cAMP/PKA signaling mediate ATP oscillations essential for prechondrogenic condensation. J. Endocrinol., 214(3), 337-48 (2012)[PubMed]

  63. (siRNA, DDS) N. Gouda, K. Miyata, RJ. Christie, T. Suma, A. Kishimura, S. Fukushima, T. Nomoto, X. Liu, N. Nishiyama, and K. Kataoka, Silica nanogelling of environment-responsive PEGylated polyplexes for enhanced stability and intracellular delivery of siRNA. Biomaterials, 34(2), 562-570 (2013)[PubMed]

  64. (DDS, Gene transfection) S. Mochizuki, N. Kanegaea, K. Nishina, Y. Kamikawa, K. Koiwai, H. Masunaga and K. Sakurai, The role of the helper lipid dioleoylphosphatidylethanolamine (DOPE) for DNA transfection cooperating with a cationic lipid bearing ethylenediamine. Biochim. Biophys. Acta., 1828(2), 412-418 (2012)[PubMed]

  65. (Apoptosis, Bioluminescent probe) M. Ozaki, S. Haga, T. Ozawa, In Vivo Monitoring of Liver Damage Using Caspase-3 Probe. Theranostics, 2(2), 207-14 (2012)[PubMed]

  66. (mTOR, Nutrient signaling) CS. Conn and SB. Qian, Nutrient Signaling in Protein Homeostasis: An Increase in Quantity at the Expense of Quality. Sci. Signal, 6(271), ra24 (2013)[PubMed]

  67. (Clock gene) S. Cheon, N. Park, S. Cho and K. Kim, Glucocorticoid-mediated Period2induction delays the phase of circadian rhythm. Nucleic Acid Res., 41(12), 6161-74 (2013)[PubMed]

  68. (Clock gene) H. Chen, L. Zhao, M. Kumazawa, N. Yamauchi, Y. Shigeyoshi, S. Hashimoto and M. Hattori, Downregulation of core clock gene Bmal1 attenuates expression of progesterone and prostaglandin biosynthesis-related genes in rat luteinizing granulosa cells. Am. J. Physiol. Cell Physiol., 304(12), C1131-40 (2013)[PubMed]

  69. (Clock gene) H. Chen, L. Zhao, G. Chu, G. Kito, N. Yamauchi, Y. Shigeyoshi, S. Hashimoto and M. Hattori, FSH induces the development of circadian clockwork in rat granulosa cells via a gap junction protein Cx43-dependent pathway. Am. J. Physiol. Endocrinol. Metab., 304(6), E566-75 (2013)[PubMed]

  70. (Clock gene) H. Tasaki, L. Zhao, K. Isayama, H. Chen, N. Yamauchi, Y. Shigeyoshi, S. Hashimoto and M. Hattori, Profiling of circadian genes expressed in the uterus endometrial stromal cells of pregnant rats as revealed by DNA microarray coupled with RNA interference. Front Endocrinol., 4, 82 (2013)[PubMed]

  71. (Clock gene) F. Yang, I. Inoue, M. Kumagai, S. Takahashi, Y. Nakajima and M. Ikeda, Real-Time Analysis of the Circadian Oscilletion of the Rev-Erbβ Promoter. J. Atheroscler. Thromb., 20(3), 267-76 (2013)[PubMed]

  72. (Clock gene) R. Satou, N. Sugihara, Y. Ishizuka, T. Matsukubo and Y. Onishi, DNA methylation of the BMAL1 promoter. Biochem. Biophys. Res. Commun., 440(3), 449-53 (2013)[PubMed]

  73. (Bioluminescent probe, Signal transduction) L. Yang, Y. Nasu, M. Hattori, H. Yoshimura, A. Kanno and T. Ozawa, Bioluminescent Probes to Analyze Ligand-Induced Phosphatidylinositol 3,4,5-Trisphosphate Production with Split Luciferase Complementation. Anal. Chem., 85(23), 11352-9 (2013)[PubMed]

  74. (Bioluminescent probe, Intracellular acidification) M. Hattori, S. Haga, H. Takakura, M. Ozaki and T. Ozawa, Sustained accurate recording of intracellular acidification in living tissues with a photo-controllable bioluminescent protein. Proc. Natl. Acad. Sci. USA., 110(23), 9332-7 (2013)[PubMed]

  75. (Clock gene) A. Hirano, K. Yumimoto, R. Tsunematsu, M. Matsumoto, M. Oyama, H. Kozuka-Hata, T. Nakagawa, D. Lanjakornsiripan, KI. Nakayama and Y. Fukada, FBXL21 Regulates Oscillation of the Circadian Clock through Ubiquitination and Stabilization of Cryptochromes. Cell, 152(5), 1106-18 (2013)[PubMed]

  76. (Proteolysis, siRNA) Y. Tsuchiya, H. Taniguchi, Y. Ito, T. Morita, MR. Karim, N. Ohtake, K. Fukagai, T. Ito, S. Okamuro, S. Iemura, T. Natsume, E. Nishida and A. Kobayashi, The Casein Kinase 2-Nrf1 Axis Controls the Clearance of Ubiquitinated Proteins by Regulating Proteasome Gene Expression. Mol. Cell Biol., 33(17), 3461-72 (2013)[PubMed]

  77. (Chondrogenesis, ATP oscillations) HJ. Kwon and Y. Ohmiya, Metabolomic Analysis of Differential Changes in Metabolites during ATP Oscillations in Chondrogenesis. Biomed. Res. Int., Epub 213972 (2013)[PubMed]

  78. (Chondrogenesis, ATP oscillations) HJ. Kwon, ATP oscillations mediate inductive action of FGF and Shh signaling on prechondrogenic condensation. Cell Biochem. Funct., 31(1), 75-81 (2013)[PubMed]

  79. (Chondrogenesis , ATP, Oxygen) HJ. Kwon, Y. Ohmiya and K. Yasuda, Simultaneous monitoring of intracellular ATP and oxygen levels in chondrogenic differentiation using a dual-color bioluminescence reporter. Luminescence, Epub 22 Oct (2013)[PubMed]

  80. (Clock gene) A. Natsubori, K. Honma and S. Honma, Differential responses of circadian Per2 expression rhythms in discrete brain areas to daily injection of methamphetamine and restricted feeding in rats. Eur. J. Neurosci., 37, 251-8 (2013)[PubMed]

  81. (Clock gene) D. Ono, S. Honma and K. Honma, Cryptochromes are critical for the development of coherent circadian rhythms in the mouse suprachiasmatic nucleus. Nat. Commun., 4, 1666 (2013)[PubMed]

  82. (Clock gene) JY. Noh, DH. Han, MH. Kim, IG. Ko, SE. Kim, N. Park, HK. Choe, KH. Kim, K. Kim, CJ. Kim and S. Cho, Presence of multiple peripheral circadian oscillators in the tissues controlling voiding function in mice. Exp. Mol. Med., 46, e81 (2014)[PubMed]

  83. (Clock gene) S. Nishide, K. Hashimoto, T. Nishio, K. Honma, S. Honma, Organ-specific development characterizes circadian clock gene Per2 expression in rats. Am. J. Physiol. Regul. Integr. Comp. Physiol., 306(1), R67-74 (2014)[PubMed]

  84. (Clock gene) NC. Gossan, F. Zhang, B. Guo, D. Jin, H. Yoshitane, A. Yao, N. Glossop, YQ. Zhang, Y. Fukada and QJ. Meng, The E3 ubiquitin ligase UBE3A is an integral component of the molecular circadian clock through regulating the BMAL1 transcription factor. Nucleic Acids Res., 42(9), 5765-75 (2014)[PubMed]

  85. (Clock gene) A. Natsubori, K. Honma and S. Honma, Dual regulation of clock gene Per2expression in discrete brain areas by the circadian pacemaker and methamphetamine-induced oscillator in rats. Eur. J. Neurosci., 39(2), 229-40 (2014)[PubMed]

  86. (DDS) H. Tanaka, H. Akita, R. Ishiba, K. Tange, M. Arai, K. Kubo and H. Harashima, Neutral biodegradable lipid-envelope-type nanoparticle using vitamin A-Scaffold for nuclear targeting of plasmid DNA. Biomaterials, 35(5), 1755-61 (2014)[PubMed]

  87. (DDS, siRNA) S. Murayama, P. Kos, K. Miyata, K Kataoka, E. Wagner and M. Kato, Gene Regulation by Intracellular Delivery and Photodegradation of Nanoparticles Containing Small Interfering RNA. Macromol. Biosci., 14(5), 626-31 (2014)[PubMed]

  88. (Clock gene) Y. Ogawa, Y. Kawano, Y. Yamazaki and Y. Onishi, Shikonin shortens the circadian period: Possible involvement of Top2 inhibition. Biochem. Biophys. Res. Commun., 443(1), 339-43 (2014)[PubMed]

  89. (DDS, siRNA) HJ. Kim, K. Miyata, T. Nomoto, M. Zheng, A. Kim, X. Liu, H. Cabral, RJ. Christie, N. Nishiyama and K. Kataoka, siRNA delivery from triblock copolymer micelles with spatially-ordered compartments of PEG shell, siRNA-loaded intermediate layer, and hydrophobic core. Biomaterials, 35(15), 4548-56 (2014)[PubMed]

  90. (Clock gene) SK. Chun, J. Jang, S. Chung, H. Yun, NJ. Kim, JW. Jung, GH. Son, YG. Suh and K. Kim, Identification and Validation of Cryptochrome Inhibitors That Modulate the Molecular Circadian Clock. ACS Chem. Biol., 9(3), 703-10 (2014)[PubMed]

  91. (DDS, Cancer) GX. Zhao, H. Tanaka, CW. Kim, K. Li, D. Funamoto, T. Nobori, Y. Nakamura, T. Niidome, A. Kishimura, T. Mori and Y. Katayama, Histidinylated poly-L-lysine-based vectors for cancer-specific gene expression via enhancing the endosomal escape. J. Biomater. Sci. Polym. Ed., 25(5), 519-34 (2014)[PubMed]

  92. (Clock gene) SR. Moore, J. Pruszka, J. Vallance, E. Aihara, T. Matsuura, MH. Montrose, NF. Shroyer and CI. Hong, Robust circadian rhythms in organoid cultures from PERIOD2::LUCIFERASE mouse small intestine. Dis. Models Mech., 7(9), 1123-30 (2014)[PubMed]

  93. (DDS, siRNA) Y. Oe, RJ. Christie, M. Naito, SA. Low, S. Fukushima, K. Toh, Y. Miura, Y. Matsumoto, N. Nishiyama, K. Miyata and K. Kataoka, Actively-targeted polyion complex micelles stabilized by cholesterol and disulfide cross-linking for systemic delivery of siRNA to solid tumors. Biomaterials, 35(27), 7887-95 (2014)[PubMed]

  94. (Clock gene) SK. Chun, J. Jang, S. Chung, H. Yun, NJ. Kim, JW. Jung, GH. Son, YG. Suh and K. Kim, Identification and Validation of Cryptochrome Inhibitors That Modulate the Molecular Circadian Clock. ACS Chem. Biol., 9(3), 703-10 (2014)[PubMed]

  95. (Chondrogenesis, ATP oscillations) HJ. Kwon, S. Kurono, Y. Kaneko, Y. Ohmiya and K. Yasuda, Analysis of proteins showing differential changes during ATP oscillations in chondrogenesis. Cell Biochem. Funct., 32(5), 429-37 (2014)[PubMed]

  96. (Clock gene, Allergy) Y. Nakamura, N. Nakano, K. Ishimaru, M. Hara, T. Ikegami, Y. Tahara, R. Katoh, H. Ogawa, K. Okumura, S. Shibata, C. Nishiyama and A. Nakao, Circadian regulation of allergic reactions by the mast cell clock in mice. J. Allergy Clin. Immunol., 133(2), 568-75 (2014)[PubMed]

  97. (Clock gene) M. Kawamura, H. Tasaki, I. Misawa, G. Chu, N. Yamauchi and M. Hattori, Contribution of testosterone to the clock system in rat prostate mesenchyme cells. Andrology, 2(2), 225-33 (2014)[PubMed]

  98. (Clock gene) N. Kon, T. Yoshikawa, S. Honma, Y. Yamagata, H. Yoshitane, K. Shimizu, Y. Sugiyama, C. Hara, I. Kameshita, K. Honma and Y. Fukada, CaMKII is essential for cellular clock and coupling between morning and evening behavioral rhythms. Genes Dev., 28, 1101-1110, (2014)[PubMed]

  99. (Clock gene) K. Isayama, H. Chen, N. Yamauchi and M. Hattori, REV-ERBα Inhibits the PTGS2 Expression in Bovine Uterus Endometrium Stromal and Epithelial Cells Exposed to Ovarian Steroids. J. Reprod. Dev., 60(5), 362-370 (2014)[PubMed]

  100. (Intracellular calcium) S. Suzuki, K. Murotomi, Y. Nakajima, K. Kawai, K. Ohta, K. Warita, T. Miki and Y. Takeuchi, Development of an Artificial Calcium-Dependent Transcription Factor To Detect Sustained Intracellular Calcium Elevation. ACS Synth. Biol., 3(10), 717-722 (2014)[PubMed]

  101. (Development) M. Matsuda, M. Koga, K. Woltjen, E. Nishida and M. Ebisuya, Synthetic lateral inhibition governs cell-type bifurcation with robust ratios. Nat. Commun., 6, 6196 (2015)[PubMed]

  102. (Chondrogenesis, ATP) HJ. Kwon and Y. Han, Dual Monitoring of Secretion and ATP Levels during Chondrogenesis Using Perfusion Culture-Combined Bioluminescence Monitoring System. Biomed. Res. Int., 219068 (2015)[PubMed]

  103. (Stress) X. Gao, J. Wan, B. Liu, M. Ma, B. Shen and SB. Qian, Quantitative profiling of initiating ribosomes in vivo. Nat. Methods, 12(2), 147-153 (2015)[PubMed]

  104. (Heat shock response) J. Zhou, J. Wan, X. Gao, X. Zhang, SR. Jaffrey and SB. Qian, Dynamic m6A mRNA methylation directs translational control of heat shock response. Nature, 526(7574), 591-594 (2015)[PubMed]

  105. (Clock gene) Y. Lee, SK. Chun and K. Kim, Sumoylation controls CLOCK-BMAL1-mediated clock resetting via CBP recruitment in nuclear transcriptional foci. Biochim. Biophys. Acta, 1853(10), 2697-2708 (2015)[PubMed]

  106. (Clock gene) J. Koo, HK. Choe, HD. Kim, SK. Chun, GH. Son and K. Kim, Effect of Mefloquine, a Gap Junction Blocker, on Circadian Period2 Gene Oscillation in the Mouse Suprachiasmatic Nucleus Ex Vivo. Endocrinol. Metab., 30(3), 361-370 (2015)[PubMed]

  107. (Aldosterone synthesis) D. Yarimizu, M. Doi, T. Ota and H. Okamura, Stimulus-selective induction of the orphan nuclear receptor NGFIB underlies different influences of angiotensin II and potassium on the human adrenal gland zona glomerulosaspecific 3β-HSD isoform gene expression in adrenocortical H295R cells. Endocr. J., 62(9), 765-776 (2015)[PubMed]

  108. (Clock gene) M. Nakajima, S. Koinuma and Y. Shigeyoshi, Reduction of translation rate stabilizes circadian rhythm and reduces the magnitude of phase shift. Biochem. Biophys. Res. Commun., 464(1), 354-359 (2015)[PubMed]

  109. (Clock gene) H. Tasaki, L. Zhao, K. Isayama, H. Chen, N. Yamauchi, Y. Shigeyoshi, S. Hashimoto and M. Hattori, Inhibitory role of REV-ERBα in the expression of bone morphogenetic protein gene family in rat uterus endometrium stromal cells. Am. J. Physiol. Cell Physiol., 308(7), C528-538 (2015)[PubMed]

  110. (Clock gene) K. Isayama, L. Zhao, H. Chen, N. Yamauchi, Y. Shigeyoshi, S. Hashimoto and M. Hattori, Removal of Rev-erbα inhibition contributes to the prostaglandin G/H synthase 2 expression in rat endometrial stromal cells. Am. J. Physiol. Endocrinol. Metab., 308(8), E650-661 (2015)[PubMed]

  111. (Clock gene) H. Chen, K. Isayama, M. Kumazawa, L. Zhao, N. Yamauchi, Y. Shigeyoshi, S. Hashimoto and M. Hattori, Integration of the nuclear receptor REV-ERBα linked with circadian oscillators in the expressions of Alas1, Ppargc1a, and Il6 genes in rat granulosa cells. Chronobiol. Int., 32(6), 739-749 (2015)[PubMed]

  112. (Carcinogenesis) RS. Kalra, CT. Cheung, A. Chaudhary, J. Prakash, SC. Kaul and Renu Wadhwa, CARF (Collaborator of ARF) overexpression in p53-deficient cells promotes carcinogenesis. Mol. Oncol., 9(9), 1877-1889 (2015)[PubMed]

  113. (Skin sensitization, IL-8) Y. Kimura, C. Fujimura, Y. Ito, T. Takahashi, Y. Nakajima, Y. Ohmiya and S. Aiba, Optimization of the IL-8 Luc assay as an in vitro test for skin sensitization. Toxicol. In Vitro, 29(7), 1816-1830 (2015)[PubMed]

  114. (Luciferase) M. Yasunaga, K. Murotomi, H. Abe, T. Yamazaki, S. Nishii, T. Ohbayashi, M. Oshimura, T. Noguchi, K. Niwa, Y. Ohmiya and Y. Nakajima, Highly sensitive luciferase reporter assay using a potent destabilization sequence of calpain 3. J. Biotechnol., 194, 115-123 (2015)[PubMed]

  115. (Clock gene) N. Kon, Y. Sugiyama, H. Yoshitane, I. Kameshita and Y. Fukada, Cell-based inhibitor screening identifies multiple protein kinases important for circadian clock oscillations. Commun. Integr. Biol., 8(4), e982405 (2015)[PubMed]

  116. (Clock gene) T. Tamaru, M. Hattori, K. Honda, Y. Nakahata, P. Sassone-Corsi, GTJ. van der Horst, T. Ozawa and K. Takamatsu, CRY Drives Cyclic CK2-Mediated BMAL1 Phosphorylation to Control the Mammalian Circadian Clock. PLoS Biol., 13(11), e1002293 (2015)[PubMed]

  117. (Clock gene) T. Yoshikawa, Y. Nakajima, Y. Yamada, R. Enoki, K. Watanabe, M. Yamazaki, K. Sakimura, S. Honma and K. Honma, Spatiotemporal profiles of arginine vasopressin transcription in cultured suprachiasmatic nucleus. Eur. J. Neurosci., 42(9), 2678-2689 (2015)[PubMed]

  118. (Clock gene) M. Mieda, D. Ono, E. Hasegawa, H. Okamoto, K. Honma, S. Honma and T. Sakurai, Cellular Clocks in AVP Neurons of the SCN Are Critical for Interneuronal Coupling Regulating Circadian Behavior Rhythm. Neuron, 85(5), 1103-1116 (2015)[PubMed]

  119. (Clock gene) M. Doi, I. Murai, S. Kunisue, G. Setsu, N. Uchio, R. Tanaka, S. Kobayashi, H. Shimatani, H. Hayashi, HW. Chao, Y. Nakagawa, Y. Takahashi, Y. Hotta, J. Yasunaga, M. Matsuoka, MH. Hastings, H. Kiyonari and H. Okamura, Gpr176 is a Gz-linked orphan G-protein-coupled receptor that sets the pace of circadian behavior. Nat. Commun., 7, 10583 (2016)[PubMed]

  120. (Clock gene) L. Zhao, K. Isayama, H. Chen, N. Yamauchi, Y. Shigeyoshi, S. Hashimoto and M. Hattori, The nuclear receptor REV-ERBa represses the transcription of growth/differentiation factor 10 and 15 genes in rat endometrium stromal cells. Physiol. Rep., 4(2), e12663 (2016)[PubMed]

  121. (Clock gene) ME. Goya, A. Romanowski, CS. Caldart, CY. Bénard, and DA. Golombek, Circadian rhythms identified in Caenorhabditis elegans by in vivo long-term monitoring of a bioluminescent reporter. Proc. Natl. Acad. Sci. USA, 113(48), E7837-7845 (2016)[PubMed]

  122. (Clock gene, Cell cycle) T. Matsu-ura, A. Dovzhenok, E. Aihara, J. Rood, H. Le, Y. Ren, AE. Rosselot, T. Zhang, C. Lee, K. Obrietan, MH. Montrose, S. Lim and SR. Moore, Intercellular Coupling of the Cell Cycle and Circadian Clock in Adult Stem Cell Culture. Mol. Cell, 64(5), 900-912 (2016)[PubMed]

  123. (Clock gene) A. Hirano, T. Nakagawa, H. Yoshitane, M. Oyama, H. Kozuka-Hata, D. Lanjakornsiripan and Y. Fukada, USP7 and TDP-43: Pleiotropic Regulation of Cryptochrome Protein Stability Paces the Oscillation of the Mammalian Circadian Clock. PLoS One, 11(4), e0154263 (2016)[PubMed]

  124. (Clock gene) K. Shimizu, Y. Kobayashi, E. Nakatsuji, M. Yamazaki, S. Shimba, K. Sakimura and Y. Fukada, SCOP/PHLPP1b mediates circadian regulation of long-term recognition memory. Nat. Commun., 7, 12926 (2016)[PubMed]

  125. (Clock gene) T. Yoshikawa and S. Honma, Lithium lengthens circadian period of cultured brain slices in area specific manner. Behav. Brain Res., 314, 30-37 (2016)[PubMed]

  126. (Clock gene) D. Ono, S. Honma and K. Honma, Differential roles of AVP and VIP signaling in the postnatal changes of neural networks for coherent circadian rhythms in the SCN. Sci. Adv., 2(9), e1600960 (2016)[PubMed]

  127. (Clock gene) Y. Nakamura, K. Ishimaru, S. Shibata and A. Nakao, Regulation of plasma histamine levels by the mast cell clock and its modulation by stress. Sci. Rep., 7, 39934 (2017)[PubMed]

  128. (Transcription factor) M. Futami, T. Nakano, M. Yasunaga, M. Makihara, T. Asama, Y. Hagihara, Y. Nakajima and J. Futami, Enhanced in-cell folding of reversibly cationized transcription factor using amphipathic peptide. J. Biosci. Bioeng., 123(4), 419-424 (2017)[PubMed]

  129. (Clock gene) M. Mieda, E. Hasegawa, N. Kessaris and T. Sakurai, Fine-tuning circadian rhythms: The importance of Bmal1 expression in the ventral forebrain. Front. Neurosci., 11, 55 (2017)[PubMed]

  130. (Clock gene) N. Park, JE. Song, S. Jeong, TT. Tran, HW. Ko, EY. Kim, Vaccinia-related kinase 3 (VRK3) sets the circadian period and amplitude by affecting the subcellular localization of clock proteins in mammalian cells. Biochem. Biophys. Res. Commun., 487(2), 320-326 (2017)[PubMed]

  131. (Clock gene) T. Kawauchi, K. Ishimaru, Y. Nakamura, N. Nakano, M. Hara, H. Ogawa, K. Okumura, S. Shibata and A. Nakao, Clock-dependent temporal regulation of IL-33/ST2-mediated mast cell response. Allergol. Int., 66(3), 472-478 (2017)[PubMed]

  132. (Clock gene) R. Ikarashi, H. Akechi, Y. Kanda, A. Ahmad, K. Takeuchi, E. Morioka, T. Sugiyama, T. Ebisawa, M. Ikeda and M. Ikeda, Regulation of molecular clock oscillations and phagocytic activity via muscarinic Ca2+ signaling in human retinal pigment epithelial cells. Sci. Rep., 7, 44175 (2017)[PubMed]

  133. (DDS, siRNA) M. Naito, R. Azuma, H. Takemoto, M. Hori, N. Yoshinaga, S. Osawa, R. Kamegawa, HJ. Kim, T. Ishii, N. Nishiyama, K. Miyata and K. Kataoka, Multilayered polyion complexes with dissolvable silica layer covered by controlling densities of cRGD-conjugated PEG chains for cancer-targeted siRNA delivery. J. Biomater. Sci. Polym. Ed., 28(10-12), 1109-1123 (2017)[PubMed]

  134. (Clock gene) D. Ono, S. Honma, Y. Nakajima, S. Kuroda, R. Enoki and K. Honma, Dissociation of Per1 and Bmal1 circadian rhythms in the suprachiasmatic nucleus in parallel with behavioral outputs. Proc. Natl. Acad. Sci. USA, 114(18), E3699-E3708 (2017)[PubMed]

  135. (Clock gene) T. Tomita, R. Kurita and Y. Onishi, Epigenetic regulation of the circadian clock: role of 5-aza-2’-deoxycytidine. Biosci. Rep., 37(3), BSR20170053 (2017)[PubMed]

  136. (Cytotoxicity) M. Yasunaga, Y. Fujita, R. Saito, M. Oshimura and Y. Nakajima, Continuous long-term cytotoxicity monitoring in 3D spheroids of beetle luciferase-expressing hepatocytes by nondestructive bioluminescence measurement. BMC Biotechnol., 17(1), 54 (2017)[PubMed]

  137. (Clock gene) G. Kurosawa, A. Fujioka, S. Koinuma, A. Mochizuki, Y. Shigeyoshi, Temperature-amplitude coupling for stable biological rhythms at different temperatures. PLoS Comput. Biol., 13(6), e1005501 (2017)[PubMed]

  138. (mRNA Translation) RA. Coots, XM. Liu, Y. Mao, L. Dong, J. Zhou, J. Wan, X. Zhang and SB. Qian, m6A facilitates eIF4F-independent mRNA translation. Mol. Cell, 68(3), 504-514 (2017)[PubMed]

  139. (Clock gene) N. Hayasaka, A. Hirano, Y. Miyoshi, IT. Tokuda, H. Yoshitane, J. Matsuda and Y. Fukada, Salt-inducible kinase 3 regulates the mammalian circadian clock by destabilizing PER2 protein. eLife, 6, e24779 (2017)[PubMed]

  140. (Clock gene) M. Sujino, T. Asakawa, M. Nagano, S. Koinuma, K. Masumoto and Y. Shigeyoshi, CLOCKΔ19 mutation modifies the manner of synchrony among oscillation neurons in the suprachiasmatic nucleus. Sci. Rep., 8(1), 854 (2018)[PubMed]

  141. (Clock gene) A. Sengiku, M. Ueda, J. Kono, T. Sano, N. Nishikawa, S Kunisue, K. Tsujihana, LS. Liou, A. Kanematsu and S. Shimba, M. Doi, H. Okamura, O. Ogawa and H. Negoro, Circadian coordination of ATP release in the urothelium via connexin43 hemichannels. Sci. Rep., 8(1), 1996 (2018)[PubMed]

  142. (Clock gene) T. Ihara, T. Mitsui, Y. Nakamura, M. Kanda, S. Tsuchiya, S. Kira, H. Nakagomi, N. Sawada, Y. Hirayama, K. Shibata, E. Shigetomi, Y. Shinozaki, M. Yoshiyama, A. Nakao, M. Takeda and S. Koizumi, The Circadian expression of Piezo1, TRPV4, Connexin26, and VNUT, associated with the expression levels of the clock genes in mouse primary cultured urothelial cells. Neurourol. Urodyn., 37(3), 942-951 (2018)[PubMed]

  143. (Clock gene) J. Jang, S. Chung, Y. Choi, HY. Lim, Y. Son, SK. Chun, GH. Son, K. Kim, YG. Suh, JW. Jung, The cryptochrome inhibitor KS15 enhances E-box-mediated transcription by disrupting the feedback action of a circadian transcription-repressor complex. Life Sci., 200, 49-55 (2018)[PubMed]

  144. (Clock gene, Cellular stress) K. Imamura, H. Yoshitane, K. Hattori, M. Yamaguchi, K. Yoshida, T. Okubo, I. Naguro, H. Ichijo and Y. Fukada, ASK family kinases mediate cellular stress and redox signaling to circadian clock. Proc. Natl. Acad. Sci. USA, 115(14), 3646-3651 (2018)[PubMed]

  145. (Clock gene) E. Morioka, Y. Kanda, H. Koizumi, T. Miyamoto and M. Ikeda, Histamine regulates molecular clock oscillations in human retinal pigment epithelial cells via H1 receptors. Front. Endocrinol., 9, 108 (2018)[PubMed]

  146. (Necroptosis, Hypoxia) S. Haga, A. Kanno, T. Ozawa, N. Morita, M. Asano and M. Ozaki, Detection of necroptosis in ligand-mediated and hypoxia-induced injury of hepatocytes using a novel optic probe-detecting receptor-Interacting protein (RIP)1/RIP3 Binding. Oncol. Res., 26(3), 503-513 (2018)[PubMed]

  147. (DDS) H. Tanaka, T. Nakatani, T. Furihata, K. Tange, Y. Nakai, H. Yoshioka, H. Harashima and H. Akita, In vivo introduction of mRNA encapsulated in lipid nanoparticles to brain neuronal cells and astrocytes via intracerebroventricular administration. Mol. Pharm., 15(5), 2060-2067 (2018)[PubMed]

  148. (Clock gene, Review) C. Ramanathan and AC. Liu, Developing mammalian cellular clock models using firefly luciferase reporter. Methods Mol. Biol., 1755, 49-64 (2018)[PubMed]

  149. (Myogenesis) Q. Li, H. Yoshimura, M. Komiya, K. Tajiri, M. Uesugi, Y. Hata and T. Ozawa, A robust split-luciferase-based cell fusion screening for discovering myogenesis-promoting molecules. Analyst, 143(14), 3472-3480 (2018)[PubMed]

  150. (Clock gene) S. Nishide, S. Honma and K. Honma, Two coupled circadian oscillations regulate Bmal1-ELuc and Per2-SLR2 expression in the mouse suprachiasmatic nucleus. Sci. Rep., 8(1), 14765 (2018)[PubMed]

  151. (Anti-inflammation, IL-6, IL-10) P. Saiki, Y. Nakajima, LJLD. Van Griensven, K. Miyazaki, Real-time monitoring of IL-6 and IL-10 reporter expression for anti-inflammation activity in live RAW 264.7 cells. Biochem. Biophys. Res. Commun., 503(3), 885-890 (2018)[PubMed]

  152. (Clock gene, UV stress) G. Kawamura, M. Hattori, K. Takamatsu, T. Tsukada, Y. Ninomiya, I. Benjamin, P. Sassone-Corsi, T. Ozawa and T. Tamaru, Cooperative interaction among BMAL1, HSF1, and p53 protects mammalian cells from UV stress. Commun. Biol., 1, 204 (2018)[PubMed]

  153. (Clock gene) AR. Saran, D. Kalinowska, S. Oh, R. Janknecht, L. DiTacchio, JMJD5 links CRY1 function and proteasomal degradation. PLoS Biol., 16(11), e2006145 (2018)[PubMed]

  154. (Clock gene) J. Lee, E. Park, GH. Kim, I. Kwon and K. Kim, A splice variant of human Bmal1 acts as a negative regulator of the molecular circadian clock. Exp. Mol. Med., 50(12), 159 (2018)[PudMed]

  155. (Clock gene) Y. Maruyama, Y. Asaoka, K. Nakahama, T. Tamaru, K. Takamatsu, N. Takamatsu, A. Hattori, S. Nishina, N. Azuma, A. Kawahara, K. Kume and H. Nishina, The clock components Period2, Cryptochrome1a, and Cryptochrome2a function in establishing light-dependent behavioral rhythms and/or total activity levels in zebrafish. Sci. Rep., 9(1), 196 (2019)[PubMed]

  156. (Clock gene, ER stress) L. Gao, H. Chen, C. Li, Y. Xiao, D. Yang, M. Zhang, D. Zhou, W. Liu, A. Wang and Y. Jin, ER stress activation impairs the expression of circadian clock and clock-controlled genes in NIH3T3 cells via an ATF4-dependent mechanism. Cell. Signal., 57, 89-101 (2019)[PubMed]

Kronos HT (WSL-1565)

  1. (Cytotoxicity) S. Wakuri, K. Yamakage, Y. Kazuki, K. Kazuki, M. Oshimura, S. Aburatani, M. Yasunaga and Y. Nakajima, Correlation between luminescence intensity and cytotoxicity in cell-based cytotoxicity assay using luciferase. Anal. Biochem., 522, 18-29 (2017)[PubMed]

  2. (Oxidative stress) Y. Tabei, K. Murotomi, A. Umeno, M. Horie, Y. Tsujino, B. Masutani, Y. Yoshida, Y. Nakajima, Antioxidant properties of 5-hydroxy-4-phenyl-butenolide via activation of Nrf2/ARE signaling pathway. Food Chem. Toxicol., 107(A), 129-137 (2017)[PubMed]

  3. (Micro RNA) Y. Mie, Y. Hirano, K. Kowata, A. Nakamura, M. Yasunaga, Y. Nakajima and Y. Komatsu, Function control of anti-microRNA oligonucleotides using interstrand cross-linked duplexes, Mol. Ther. Nucleic Acids, 10, 64-74 (2018)[PubMed]

  4. (Anti-inflammation) P. Saiki, Y. Kawano, Y. Nakajima, LJLD. Van Griensven and K. Miyazaki, Novel and stable dual-color IL-6 and IL-10 reporters derived from RAW 264.7 for anti-inflammation screening of natural products. Int. J. Mol. Sci., 20(18), 4620 (2019)[PubMed]

  5. (Cytotoxicity) S. Iwado, S. Abe, M. Oshimura, Y. Kazuki and Y. Nakajima, Bioluminescence measurement of time-dependent dynamic changes of CYP-mediated cytotoxicity in CYP-expressing luminescent HepG2 cells. Int. J. Mol. Sci., 22(6), 2843 (2021)[PubMed]

  6. (Clock gene) JS. Huh, S. Lee, DS. Kim, MS. Choi, H. Choi and KH. Lee, Antioxidative and circadian rhythm regulation effect of Quercus gilva extract. J. Korean Wood Sci. Technol., 50(5), 338-352 (2022)[Link]

LumiFL

LumiFL SpectroCapture (AB-1850)

  1. Y. Nakajima, K. Kobayashi, K. Yamagishi, T. Enomoto and Y. Ohmiya, cDNA Cloning and Characterization of a Secreted Luciferase from the Luminous Japanese Ostracod, Cypridina noctiluca. Biosci. Biotechnol. Biochem., 68(3), 565-570 (2004)[PubMed]

  2. Y. Nakajima, T. Kimura, C. Suzuki and Y. Ohmiya, Improved Expression of Novel Red- and Green-emitting Luciferases of Phrixothrix Railroad Worms in Mammalian Cells. Biosci. Biotechnol. Biochem., 68(4), 948-951 (2004)[PubMed]

  3. Y. Nakajima, M. Ikeda, T. Kimura, S. Honma, Y. Ohmiya and K. Honma, Bidirectional role of orphan nuclear receptor RORα in clock gene transcriptions demonstrated by a novel reporter assay system. FEBS Lett., 565, 122-126 (2004)[PubMed]

  4. T. Otsuji, E. Okuda-Ashitaka, S. Kojima, H. Akiyama, S. Ito and Y. Ohmiya, Monitoring for dynamic biological processing by intramolecular bioluminescence resonance energy transfer system using secreted luciferase.  Anal. Biochem., 329, 230-237 (2004)[PubMed]

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  24. SB. Kim, M. Torimura and H. Tao, Creation of Artificial Luciferases for Bioassays. Bioconjug. Chem., 24(12), 2067-2075 (2013)[PubMed]

  25. SB. Kim, T. Suzuki and A. Kimura, A Bioluminescent Assay System for Whole-Cell Determination of Hormones. Chem. Pharm. Bull., 61(7), 706-713 (2013)[PubMed]

  26. Y. Takenaka, A. Noda-Ogura, T. Imanishi, A. Yamaguchi, T. Gojobori and Y. Shigeri, Computational analysis and functional expression of ancestral copepod luciferase. Gene, 528(2), 201-205 (2013)[PubMed]

  27. S. Iwano, R. Obata, C. Miura, M. Kiyama, K. Hama, M. Nakamura, Y. Amano, S. Kojima, T. Hirano, S. Maki and H. Niwa, Development of simple firefly luciferin analogs emitting blue, green, red, and near-infrared biological window light. Tetrahedron, 69(19), 3847-3856 (2013)[Link]

  28. C. Miura, M. Kiyama, S. Iwano, K. Ito, R. Obata, T. Hirano, S. Maki and H. Niwa, Synthesis and luminescence properties of biphenyl-type firefly luciferin analogs with a new, near-infrared light-emitting bioluminophore. Tetrahedron, 69(46), 9726-9734 (2013)[Link]

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  33. Y. Ishii, C. Hayashi, Y. Suzuki and T. Hirano, Chemiluminescent 2,6-diphenylimidazo[1,2-a]pyrazin-3(7H)-ones: a new entry to Cypridina luciferin analogues. Photochem. Photobiol. Sci., 13(2), 182-189 (2014)[PubMed]

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  38. DT. Amaral, G. Oliveira, JR. Silva and VR. Viviani, A new orange emitting luciferase from the Southern-Amazon Pyrophorus angustus (Coleoptera: Elateridae) click-beetle: structure and bioluminescence color relationship, evolutional and ecological considerations. Photochem. Photobiol. Sci., 15(9), 1148-1154 (2016)[PubMed]

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  45. SB. Kim, R. Nishihara, D. Citterio and K. Suzuki, Fabrication of a new lineage of artificial luciferases from natural luciferase pools. ACS Comb. Sci., 19(9), 594-599 (2017)[PubMed]

  46. N. Noda, R. Awais, R. Sutton, M. Awais and T. Ozawa, Dynamic monitoring of p53 translocation to mitochondria for the analysis of specific inhibitors using luciferase-fragment complementation. Biotechnol. Bioeng., 114(12), 2818-2827 (2017)[PubMed]

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AF-1101W Fermograph

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